Dynamic Metabolic Simulation - IWPACBB 2009


Instructions


Dependencies:

The use of Java JRE 1.6.x is mandatory.

Running:

  1. download the archive DynamicSimulator[Windows/Linux].zip from the link bellow
  2. extract the files therein contained to a directory of your choice
  3. to start the software use the command inside the DynamicModelSimulator directory:

    sh run.sh(in linux) or execute the run.bat(in windows)



Downloads:

Software source/binary and examples (Linux) - DynamicSimulatorLinux.zip - Now at Optflux site
Software source/binary and examples (Windows) - DynamicSimulatorWindows.zip - Now at Optflux site
SBML Central Carbon Metabolism of Escherichia coli - ecoli.xml


License:




Copyright 2008
CCTC - Computer Science and Technology Center
IBB-CEB - Institute for Biotechnology and Bioengineering - Centre of Biological Engineering
University of Minho


This is free software: you can redistribute it and/or modify
it under the terms of the GNU Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.

This code is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Public License for more details.

You should have received a copy of the GNU Public License
along with this code. If not, see http://www.gnu.org/licenses/>

Created inside the SysBio Research Group (http://sysbio.di.uminho.pt)